Unsets the notes for each element in the given SBML file.
#include <iostream>
using namespace std;
int
main (int argc, char* argv[])
{
if (argc != 3)
{
cout << endl << "Usage: unsetNotes <input-filename> <output-filename>" << endl << endl;
return 1;
}
unsigned int i,j;
const char* filename = argv[1];
if(errors > 0)
{
delete document;
return errors;
}
{
{
}
{
}
{
}
{
{
}
}
}
{
}
{
}
{
}
{
}
{
}
{
}
{
}
{
{
}
}
{
}
{
}
delete document;
return errors;
}
Include all SBML types in a single header file.
int writeSBML(const SBMLDocument_t *d, const char *filename)
Writes the given SBML document d to the file named by filename.
@sbmlpackage{core}
Definition: Compartment.h:490
@sbmlpackage{core}
Definition: Constraint.h:158
@sbmlpackage{core}
Definition: EventAssignment.h:296
@sbmlpackage{core}
Definition: Event.h:355
const EventAssignment * getEventAssignment(unsigned int n) const
Return a specific EventAssignment object of this Event.
Definition: Event.cpp:1064
unsigned int getNumEventAssignments() const
Returns the number of EventAssignment objects attached to this Event.
Definition: Event.cpp:1106
@sbmlpackage{core}
Definition: FunctionDefinition.h:150
@sbmlpackage{core}
Definition: InitialAssignment.h:289
@sbmlpackage{core}
Definition: KineticLaw.h:203
unsigned int getNumParameters() const
Returns the number of parameters in this KineticLaw instance.
Definition: KineticLaw.cpp:837
const Parameter * getParameter(unsigned int n) const
Returns the nth Parameter object in the list of parameters in this KineticLaw instance.
Definition: KineticLaw.cpp:740
@sbmlpackage{core}
Definition: Model.h:485
unsigned int getNumSpecies() const
Get the number of Species objects in this Model.
Definition: Model.cpp:3254
unsigned int getNumFunctionDefinitions() const
Get the number of FunctionDefinition objects in this Model.
Definition: Model.cpp:3204
const Rule * getRule(unsigned int n) const
Get the nth Rule object in this Model.
Definition: Model.cpp:2845
const Species * getSpecies(unsigned int n) const
Get the nth Species object in this Model.
Definition: Model.cpp:2695
unsigned int getNumParameters() const
Get the number of Parameter objects in this Model.
Definition: Model.cpp:3283
unsigned int getNumSpeciesTypes() const
Get the number of SpeciesType objects in this Model.
Definition: Model.cpp:3234
unsigned int getNumRules() const
Get the number of Rule objects in this Model.
Definition: Model.cpp:3303
const InitialAssignment * getInitialAssignment(unsigned int n) const
Get the nth InitialAssignment object in this Model.
Definition: Model.cpp:2779
unsigned int getNumInitialAssignments() const
Get the number of InitialAssignment objects in this Model.
Definition: Model.cpp:3293
const SpeciesType * getSpeciesType(unsigned int n) const
Get the nth SpeciesType object in this Model.
Definition: Model.cpp:2611
const Parameter * getParameter(unsigned int n) const
Get the nth Parameter object in this Model.
Definition: Model.cpp:2737
const Reaction * getReaction(unsigned int n) const
Get the nth Reaction object in this Model.
Definition: Model.cpp:3056
const UnitDefinition * getUnitDefinition(unsigned int n) const
Get the nth UnitDefinition object in this Model.
Definition: Model.cpp:2527
unsigned int getNumUnitDefinitions() const
Get the number of UnitDefinition objects in this Model.
Definition: Model.cpp:3214
const Compartment * getCompartment(unsigned int n) const
Get the nth Compartment object in this Model.
Definition: Model.cpp:2653
unsigned int getNumCompartments() const
Get the number of Compartment objects in this Model.
Definition: Model.cpp:3244
unsigned int getNumReactions() const
Get the number of Reaction objects in this Model.
Definition: Model.cpp:3323
const Constraint * getConstraint(unsigned int n) const
Get the nth Constraint object in this Model.
Definition: Model.cpp:3036
const Event * getEvent(unsigned int n) const
Get the nth Event object in this Model.
Definition: Model.cpp:3162
const FunctionDefinition * getFunctionDefinition(unsigned int n) const
Get the nth FunctionDefinitions object in this Model.
Definition: Model.cpp:2485
unsigned int getNumConstraints() const
Get the number of Constraint objects in this Model.
Definition: Model.cpp:3313
unsigned int getNumEvents() const
Get the number of Event objects in this Model.
Definition: Model.cpp:3333
@sbmlpackage{core}
Definition: ModifierSpeciesReference.h:92
@sbmlpackage{core}
Definition: Parameter.h:202
@sbmlpackage{core}
Definition: Reaction.h:224
unsigned int getNumReactants() const
Returns the number of reactant species in this Reaction.
Definition: Reaction.cpp:1282
const KineticLaw * getKineticLaw() const
Returns the KineticLaw object contained in this Reaction.
Definition: Reaction.cpp:400
const SpeciesReference * getProduct(unsigned int n) const
Returns the nth product species (as a SpeciesReference object) in the list of products in this Reacti...
Definition: Reaction.cpp:1191
bool isSetKineticLaw() const
Predicate returning true if this Reaction contains a kinetic law object.
Definition: Reaction.cpp:474
unsigned int getNumModifiers() const
Returns the number of modifier species in this Reaction.
Definition: Reaction.cpp:1303
unsigned int getNumProducts() const
Returns the number of product species in this Reaction.
Definition: Reaction.cpp:1292
const ModifierSpeciesReference * getModifier(unsigned int n) const
Returns the nth modifier species (as a ModifierSpeciesReference object) in the list of modifiers of t...
Definition: Reaction.cpp:1234
const SpeciesReference * getReactant(unsigned int n) const
Returns the nth reactant species (as a SpeciesReference object) in the list of reactants in this Reac...
Definition: Reaction.cpp:1148
@sbmlpackage{core}
Definition: Rule.h:163
@sbmlpackage{core}
Definition: SBMLDocument.h:349
unsigned int getNumErrors() const
Returns the number of errors or warnings encountered during parsing, consistency checking,...
Definition: SBMLDocument.cpp:1197
void printErrors(std::ostream &stream=std::cerr) const
Prints all the errors or warnings encountered trying to parse, check, or translate this SBML document...
Definition: SBMLDocument.cpp:1220
const Model * getModel() const
Returns the Model object stored in this SBMLDocument.
Definition: SBMLDocument.cpp:372
@sbmlpackage{core}
Definition: SBMLReader.h:343
SBMLDocument * readSBML(const std::string &filename)
Reads an SBML document from the given file.
Definition: SBMLReader.cpp:112
int unsetNotes()
Unsets the value of the "notes" subelement of this SBML object.
Definition: SBase.cpp:2633
@sbmlpackage{core}
Definition: Species.h:429
@sbmlpackage{core}
Definition: SpeciesReference.h:281
@sbmlpackage{core}
Definition: SpeciesType.h:109
@sbmlpackage{core}
Definition: UnitDefinition.h:282
#define LIBSBML_CPP_NAMESPACE_USE
Definition: libsbml-namespace.h:72