Class MergeFunctionalGroups


  • public class MergeFunctionalGroups
    extends java.lang.Object

    A class containing an application for merging the functional groups of multiple instances for consistency.

    The merge can be performed on specified subsets of functional groups, such as those related to spatial information.

    • Constructor Detail

      • MergeFunctionalGroups

        public MergeFunctionalGroups​(FunctionalGroupUtilities.Selector selector,
                                     java.lang.String src,
                                     java.lang.String dstFolderName,
                                     MessageLogger logger)
                              throws java.io.IOException,
                                     DicomException

        Merge the functional groups of multiple instances for consistency.

        Parameters:
        selector - selected functional groups to merge
        src - source folder or DICOMDIR
        dstFolderName - destination folder
        logger - logger to send progress, warnings and errors
        Throws:
        java.io.IOException - if there is a problem reading or writing
        DicomException - if there is a problem parsing or extracting required content
      • MergeFunctionalGroups

        public MergeFunctionalGroups​(FunctionalGroupUtilities.Selector selector,
                                     java.lang.String[] srcs,
                                     java.lang.String dstFolderName,
                                     MessageLogger logger)
                              throws java.io.IOException,
                                     DicomException

        Merge the functional groups of multiple instances for consistency.

        Parameters:
        selector - selected functional groups to merge
        srcs - source folders or DICOMDIRs
        dstFolderName - destination folder
        logger - logger to send progress, warnings and errors
        Throws:
        java.io.IOException - if there is a problem reading or writing
        DicomException - if there is a problem parsing or extracting required content
    • Method Detail

      • replaceDimensionsModuleWithMerged

        protected void replaceDimensionsModuleWithMerged​(AttributeList targetList)
      • replaceFunctionalGroupsWithMerged

        protected void replaceFunctionalGroupsWithMerged​(AttributeList targetList)
      • main

        public static void main​(java.lang.String[] arg)

        Merge the functional groups of multiple instances for consistency.

        The files are processed in the order in which they are specified on the command line, and when there is a conflict, the first encountered functional group values are used.

        Functional group arguments recognized are -all|-spatial|-framecontent|-unclassified.

        If -framecontent is specified, the Dimensions Module will also be merged (the earliest encountered will be used).

        Parameters:
        arg - array of 2 or more strings - an optional list of functional groups to merge (if absent, defaults to all), followed by one or more source folders or DICOMDIR (to merge and use as a source of functional groups), and a destination folder