All Classes

  • AbinitReader
  • AboutDialog
  • ActionManager
  • ActionManagerMT
  • AdfReader
  • AFLOWReader
  • AimsReader
  • AlchemyReader
  • AlphaMonomer
  • AlphaPolymer
  • AlphaPolymer.Code
  • AminoMonomer
  • AminoPolymer
  • AmpacReader
  • AnimationManager
  • AnimationThread
  • Annotation
  • AnnotationParser
  • ApbsReader
  • AppConsole
  • AppletConsole
  • AppletConsole
  • AppletWrapper
  • ArrayListTransferHandler
  • ASimpleJvxlWriter
  • Atom
  • Atom
  • AtomCollection
  • AtomData
  • AtomDataReader
  • AtomDataServer
  • AtomIndexIterator
  • AtomIterator
  • AtomIteratorWithinModel
  • AtomIteratorWithinModelSet
  • AtomPropertyMapper
  • AtomSetChooser
  • AtomSetChooser.AtomSet
  • AtomSetCollection
  • AtomSetCollectionReader
  • AtomSetObject
  • AtomShape
  • AtomType
  • AviCreator
  • AwtClipboard
  • AwtColor
  • AwtFile
  • AwtFont
  • AwtG2D
  • AwtSwingComponent
  • AwtSwingPopupHelper
  • Axes
  • AxesRenderer
  • Backbone
  • BackboneRenderer
  • Balls
  • BallsRenderer
  • BannerFrame
  • BasePair
  • BasisFunctionReader
  • Bbcage
  • BbcageRenderer
  • BilbaoReader
  • BinaryDcdReader
  • Binding
  • BioExt
  • BioMeshRenderer
  • BioModel
  • BioModelSet
  • BioPolymer
  • BioResolver
  • BioShape
  • BioShapeCollection
  • BioShapeRenderer
  • Bond
  • Bond
  • BondCollection
  • BondIterator
  • BondIterator
  • BondIteratorSelected
  • BondSet
  • BoxInfo
  • Bridge
  • BS
  • Bspf
  • Bspt
  • BSUtil
  • C
  • CageRenderer
  • Calculation
  • Calculations
  • CalculationsMMFF
  • CalculationsUFF
  • CarbohydrateMonomer
  • CarbohydratePolymer
  • Cartoon
  • CartoonRenderer
  • CastepDensityReader
  • CastepReader
  • CBK
  • CgdReader
  • CGO
  • CGOMesh
  • CGORenderer
  • Chain
  • ChimeMessenger
  • ChimePanel
  • ChimeToJmol
  • ChimeToJmol.ApplicationCloser
  • CifReader
  • CircleRenderer
  • ClassPreloader
  • CmdExt
  • ColorEncoder
  • ColorManager
  • CommandHistory
  • CommandWatcherThread
  • Connection
  • Connections
  • ConsoleTextArea
  • Contact
  • ContactPair
  • ContactRenderer
  • ContextToken
  • CreditsDialog
  • CrystalReader
  • CsfReader
  • CubeIterator
  • CubeReader
  • CubeReader
  • CylinderRenderer
  • DataManager
  • DefaultLogger
  • DelPhiBinaryReader
  • DgridReader
  • Dialog
  • Dialog.TypeFilter
  • Dipole
  • Dipoles
  • DipolesRenderer
  • Display
  • Display
  • DisplayPanel
  • DmolReader
  • DOMReader
  • Dots
  • DotsRenderer
  • DragBinding
  • Draw
  • Draw.EnumDrawType
  • DrawMesh
  • DrawRenderer
  • Dsn6BinaryReader
  • DSSP
  • DSSR0
  • DSSR1
  • Echo
  • EchoRenderer
  • Edge
  • Edge.EnumBondOrder
  • EfvetReader
  • EigenSort
  • Element
  • Elements
  • Ellipsoid
  • Ellipsoids
  • EllipsoidsRenderer
  • EnterListener
  • EnvelopeCalculation
  • Escape
  • EspressoReader
  • Export3D
  • FFParam
  • FIL
  • FileChooser
  • FileDropper
  • FileLoadThread
  • FileManager
  • FilePreview
  • FilePreview.FPPanel
  • FileReader
  • FileReader
  • FilesReader
  • FileTyper
  • FoldingXyzReader
  • FontLineShape
  • FontLineShapeRenderer
  • ForceField
  • ForceFieldMMFF
  • ForceFieldReader
  • ForceFieldUFF
  • Frank
  • FrankRenderer
  • G3DRenderer
  • GamessReader
  • GamessUKReader
  • GamessUSReader
  • GaussianDialog
  • GaussianFchkReader
  • GaussianReader
  • GaussianWfnReader
  • GData
  • GenericApplet
  • GenericConsole
  • GenericGraphics
  • GenericSwingPopup
  • GenericTextArea
  • GenNBOReader
  • Geodesic
  • GeoSurface
  • GeoSurfaceRenderer
  • Gesture
  • GhemicalMMReader
  • GlobalSettings
  • Graphics3D
  • GromacsReader
  • Group
  • GT
  • GuiMap
  • GulpReader
  • HallInfo
  • HallRotation
  • HallRotationTerm
  • HallTranslation
  • Halos
  • HalosRenderer
  • HB
  • HBond
  • Helix
  • HelpDialog
  • HermiteRenderer
  • HistoryFile
  • Hover
  • HoverRenderer
  • HoverWatcherThread
  • HyperChemReader
  • Image
  • Image
  • ImageDialog
  • InputReader
  • InputScannerThread
  • Int2IntHash
  • Int2IntHashEntry
  • Interface
  • InvalidSmilesException
  • IsoExt
  • IsoFxyReader
  • IsoFxyzReader
  • IsoIntersectReader
  • IsoMepReader
  • IsoMlpReader
  • IsoMOReader
  • IsoPlaneReader
  • IsoShapeReader
  • IsoSolventReader
  • Isosurface
  • IsosurfaceMesh
  • IsosurfaceRenderer
  • JaguarReader
  • JaguarReader
  • JanaReader
  • JC
  • JcampdxReader
  • JDXMOLParser
  • JmeReader
  • Jmol
  • Jmol
  • Jmol
  • JmolAbstractButton
  • JmolAdapter
  • JmolAdapterAtomIterator
  • JmolAdapterBondIterator
  • JmolAdapterStructureIterator
  • JmolAnnotationParser
  • JmolApp
  • JmolAppAPI
  • JmolAppConsoleInterface
  • JmolAppletInterface
  • JmolAsyncException
  • JmolAwtPopup
  • JmolBinding
  • JmolButton
  • JmolCallbackListener
  • JmolChimeMessenger
  • JmolConsole
  • JmolData
  • JmolDataManager
  • JmolDataReader
  • JmolDialogInterface
  • JmolDomReaderInterface
  • JmolEnvCalc
  • JmolFilesReaderInterface
  • JmolFrame
  • JmolGenericPopup
  • JmolGestureServerInterface
  • JmolGraphicsInterface
  • JmolInstance
  • JmolJDXMOLParser
  • JmolJDXMOLReader
  • JmolJniClientAdapter
  • JmolJSpecView
  • JmolJSPopup
  • JmolLabel
  • JmolMeasurementClient
  • JmolModulationSet
  • JmolMolecule
  • JmolMovieCreatorInterface
  • JmolMultiTouchAdapter
  • JmolMultiTouchClient
  • JmolMultiTouchClientAdapter
  • JmolNavigatorInterface
  • JmolNMRInterface
  • JmolObject
  • JmolPanel
  • JmolPanel.ActionChangedListener
  • JmolParallelProcessor
  • JmolPatternMatcher
  • JmolPdfCreatorInterface
  • JmolPropertyManager
  • JmolRendererInterface
  • JmolRepaintManager
  • JmolResourceHandler
  • JmolSceneGenerator
  • JmolScriptEditorInterface
  • JmolScriptEvaluator
  • JmolScriptFunction
  • JmolScriptManager
  • JmolSelectionListener
  • JmolSparshClientAdapter
  • JmolStateCreator
  • JmolStatusListener
  • JmolSyncInterface
  • JmolThread
  • JmolToggleButton
  • JmolToJSmolInterface
  • JmolTouchSimulatorInterface
  • JmolUtil
  • JmolViewer
  • JmolZipUtilities
  • JSConsole
  • JSExporter
  • JSFile
  • JSFont
  • JsG2D
  • JSModelKitPopup
  • JsonNioClient
  • JsonNioServer
  • JsonNioService
  • JSONReader
  • JSpecView
  • JSSwingPopupHelper
  • JSVInterface
  • Jvxl
  • JvxlCoder
  • JvxlData
  • JvxlReader
  • JvxlWrite
  • JvxlXmlReader
  • KeyJCheckBox
  • KeyJCheckBoxMenuItem
  • KeyJMenu
  • KeyJMenuItem
  • KeyJRadioButtonMenuItem
  • KinemageReader
  • KioskFrame
  • Labels
  • LabelsRenderer
  • LabelToken
  • Language
  • LcaoCartoon
  • LcaoCartoonRenderer
  • Leaf
  • LineRenderer
  • Logger
  • LoggerInterface
  • LogPanel
  • LoopedStreams
  • MagresReader
  • MainPopupResourceBundle
  • MapFileReader
  • MarchingCubes
  • MarchingSquares
  • MathExt
  • MdCrdReader
  • MdTopReader
  • Measurement
  • MeasurementData
  • MeasurementPending
  • MeasurementTable
  • Measures
  • MeasuresRenderer
  • MepCalculation
  • Mesh
  • MeshCapper
  • MeshCollection
  • MeshData
  • MeshData
  • MeshDataServer
  • MeshRenderer
  • MeshRibbon
  • MeshRibbonRenderer
  • MeshSlicer
  • MeshSurface
  • MessagePackReader
  • MinAngle
  • MinAtom
  • MinBond
  • MinimizationThread
  • Minimizer
  • MinObject
  • MinPosition
  • MinTorsion
  • MlpCalculation
  • MMCifReader
  • MMCifValidationParser
  • MMFFAngleCalc
  • MMFFDistanceCalc
  • MMFFESCalc
  • MMFFOOPCalc
  • MMFFSBCalc
  • MMFFTorsionCalc
  • MMFFVDWCalc
  • MMTFReader
  • MOCalculation
  • Model
  • ModelKitPopup
  • ModelKitPopupResourceBundle
  • ModelLoader
  • ModelManager
  • ModelSet
  • Modulation
  • ModulationSet
  • Mol2Reader
  • Mol3DReader
  • MoldenReader
  • MolecularOrbital
  • MolecularOrbitalRenderer
  • Molecules
  • MolReader
  • MonitorInputStream
  • Monomer
  • MopacArchiveReader
  • MopacGraphfReader
  • MopacReader
  • MopacSlaterReader
  • MOReader
  • MotionPoint
  • Mouse
  • Mouse
  • MouseState
  • MoveToThread
  • MrcBinaryReader
  • MSCifRdr
  • MSInterface
  • MsmsReader
  • MSRdr
  • Navigator
  • NBO
  • NBODialog
  • NBODialogConfig
  • NBODialogModel
  • NBODialogRun
  • NBODialogSearch
  • NBODialogView
  • NBOJob
  • NBOJobQueueManager
  • NBORenderer
  • NBOService
  • NciCalculation
  • NffReader
  • NMRCalculation
  • Node
  • Node
  • Normix
  • NucleicMonomer
  • NucleicPolymer
  • NucleicRenderer
  • NWChemReader
  • ObjReader
  • OdysseyReader
  • Orbitals
  • Orientation
  • OutputManager
  • OutputManagerAwt
  • OutputManagerJS
  • P2nReader
  • PAL
  • Parameters
  • Parser
  • PatternMatcher
  • PdbReader
  • PeriodicVolumeFileReader
  • PfaatBinding
  • PhosphorusMonomer
  • PhosphorusPolymer
  • PickleReader
  • Pixelator
  • PixelatorScreened
  • PixelatorShaded
  • PixelatorT
  • Platform
  • Platform
  • Platform
  • Platform3D
  • Plot3D
  • Plot3DRenderer
  • PltFormattedReader
  • Pmesh
  • Pmesh4Reader
  • PmeshReader
  • PmeshRenderer
  • Point3fi
  • PointGroup
  • PolygonFileReader
  • Polyhedra
  • PolyhedraRenderer
  • Polyhedron
  • PolyhedronStereoSorter
  • PopInJmol
  • PopupHelper
  • PopupResource
  • PovrayDialog
  • PqrReader
  • PrecisionRenderer
  • PreferencesDialog
  • PropertyManager
  • ProteinStructure
  • PsiReader
  • PyMOL
  • PymolAtomReader
  • PyMOLGroup
  • PyMOLMeshReader
  • PyMOLReader
  • PyMOLScene
  • QchemReader
  • QMAtom
  • QS
  • QuantumCalculation
  • QuantumPlaneCalculation
  • RadiusData
  • RadiusData.EnumType
  • Ras3DReader
  • RasmolBinding
  • RecentFilesDialog
  • Rectangle
  • RepaintManager
  • Resolver
  • Resource
  • Rgb16
  • Ribbons
  • RibbonsRenderer
  • RocketRenderer
  • Rockets
  • RocketsRenderer
  • Scene
  • ScriptButtons
  • ScriptCompiler
  • ScriptContext
  • ScriptDelayThread
  • ScriptEditor
  • ScriptError
  • ScriptEval
  • ScriptException
  • ScriptExpr
  • ScriptExt
  • ScriptFlowContext
  • ScriptFunction
  • ScriptInterruption
  • ScriptManager
  • ScriptMathProcessor
  • ScriptParallelProcessor
  • ScriptParam
  • ScriptProcess
  • ScriptProcessRunnable
  • ScriptQueueThread
  • ScriptTokenParser
  • SelectionManager
  • Shader
  • Shape
  • ShapeManager
  • ShapeRenderer
  • Sheet
  • ShelxReader
  • SiestaReader
  • SimpleMarchingCubes
  • SimpleMarchingCubesOld
  • SimpleUnitCell
  • SinglePointGesture
  • SlaterData
  • SlaterReader
  • Slice
  • SmarterJmolAdapter
  • SmilesAromatic
  • SmilesAtom
  • SmilesBond
  • SmilesExt
  • SmilesGenerator
  • SmilesMatcher
  • SmilesMatcherInterface
  • SmilesMeasure
  • SmilesParser
  • SmilesRing
  • SmilesRingSet
  • SmilesSearch
  • SmilesStereo
  • SpaceGroup
  • SpartanArchive
  • SpartanInputReader
  • SpartanReader
  • SpartanSmolReader
  • SpartanUtil
  • SphereRenderer
  • SpinThread
  • Splash
  • SplashInterface
  • Stars
  • StarsRenderer
  • StateCreator
  • StateManager
  • StateScript
  • StatusBar
  • StatusListener
  • StatusManager
  • STER
  • Sticks
  • SticksRenderer
  • STR
  • Strands
  • StrandsRenderer
  • Structure
  • Structure
  • StructureIterator
  • Subsystem
  • SurfaceFileReader
  • SurfaceGenerator
  • SurfaceReader
  • SurfaceStatus
  • SurfaceTool
  • SurfaceToolGUI
  • SV
  • Symmetry
  • SymmetryDesc
  • SymmetryInfo
  • SymmetryInterface
  • SymmetryOperation
  • T
  • TempArray
  • Tensor
  • Test
  • Text
  • TextRenderer
  • TextRenderer
  • TextShape
  • TextString
  • TickerThread
  • TickInfo
  • TimeoutThread
  • TinkerReader
  • TlsDataOnlyReader
  • Trace
  • TraceRenderer
  • Trajectory
  • TransformManager
  • TransformManager4D
  • Translator
  • TriangleData
  • TriangleRenderer
  • Triangulator
  • Turn
  • TwoPointGesture
  • Txt
  • Uccage
  • UccageRenderer
  • UFFAngleCalc
  • UFFDistanceCalc
  • UFFOOPCalc
  • UFFTorsionCalc
  • UFFVDWCalc
  • UhbdReader
  • UnitCell
  • UnitCellIterator
  • UseTable
  • Util
  • V3000Rdr
  • VaspChgcarReader
  • VaspChgcarReader
  • VaspOutcarReader
  • VaspPoscarReader
  • VDW
  • Vectors
  • VectorsRenderer
  • VertexDataServer
  • Vibration
  • VibrationThread
  • Viewer
  • Viewer.ACCESS
  • VolumeData
  • VolumeDataReader
  • VolumeFileReader
  • VoxelDataCreator
  • VTemp
  • WebExport
  • WebMOReader
  • WebPanel
  • WhatsNewDialog
  • Widgets
  • Wien2kReader
  • WrappedApplet
  • WrappedAppletLoader
  • XcrysdenReader
  • XmlArgusReader
  • XmlChem3dReader
  • XmlCmlReader
  • XmlHandler
  • XmlMagResReader
  • XmlMolproReader
  • XmlMOReader
  • XmlOdysseyReader
  • XmlQEReader
  • XmlReader
  • XmlReader
  • XmlVaspReader
  • XmlXsdReader
  • XplorReader
  • XsfReader
  • XtalSymmetry
  • XyzReader
  • ___Exporter
  • __CartesianExporter
  • __RayTracerExporter
  • _IdtfExporter
  • _MayaExporter
  • _ObjExporter
  • _PovrayExporter
  • _StlExporter
  • _TachyonExporter
  • _VrmlExporter
  • _X3dExporter