Class PairwiseAlignment


  • public class PairwiseAlignment
    extends java.lang.Object
    • Method Detail

      • getAlignmentLengthFraction

        public double getAlignmentLengthFraction()
      • getSequenceIdentity

        public double getSequenceIdentity()
      • getRmsd

        public double getRmsd()
      • getAlignment

        public int[][][] getAlignment()
      • setAlignmentLengthFraction

        public void setAlignmentLengthFraction​(double alignmentLengthFraction)
      • setSequenceIdentity

        public void setSequenceIdentity​(double sequenceIdentity)
      • setRmsd

        public void setRmsd​(double rmsd)
      • setAlignment

        public void setAlignment​(int[][][] alignment)
      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object