Package org.biojava.bio.program.fastq
FASTQ and variants sequence format IO.
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Interface Summary Interface Description FastqReader Reader for FASTQ formatted sequences.FastqWriter Writer for FASTQ formatted sequences. -
Class Summary Class Description Fastq FASTQ formatted sequence.FastqBuilder Fluent builder API for creating FASTQ formatted sequences.IlluminaFastqReader Reader forFastqVariant.FASTQ_ILLUMINA
formatted sequences.IlluminaFastqWriter Writer forFastqVariant.FASTQ_ILLUMINA
formatted sequences.SangerFastqReader Reader forFastqVariant.FASTQ_SANGER
formatted sequences.SangerFastqWriter Writer forFastqVariant.FASTQ_SANGER
formatted sequences.SolexaFastqReader Reader forFastqVariant.FASTQ_SOLEXA
formatted sequences.SolexaFastqWriter Writer forFastqVariant.FASTQ_SOLEXA
formatted sequences. -
Enum Summary Enum Description FastqVariant FASTQ sequence format variant.