pybedtools.scripts.venn_gchart

Given 3 files, creates a 3-way Venn diagram of intersections using the Google Chart API; see pybedtools.contrib.venn_maker for more flexibility.

The values in the diagram assume:

  • unstranded intersections

  • no features that are nested inside larger features

Functions

gchart(data[, outfn])

Sends data to Google Chart API

main()

Create a 3-way Venn diagram using Google Charts API

venn_gchart(a, b[, c, colors, labels, size])

a, b, and c are filenames to BED-like files.