Class BiojavaJmol


  • public class BiojavaJmol
    extends java.lang.Object
    A class that provides a simple GUI for Jmol
    Since:
    1.6
    Author:
    Andreas Prlic
    • Field Summary

      Fields 
      Modifier and Type Field Description
      static java.lang.String adapter  
      static java.lang.String smartAdapter  
      static java.lang.String viewer  
    • Constructor Summary

      Constructors 
      Constructor Description
      BiojavaJmol()  
    • Method Summary

      All Methods Static Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void evalString​(java.lang.String rasmolScript)  
      static boolean jmolInClassPath()
      returns true if Jmol can be found in the classpath, otherwise false.
      static void main​(java.lang.String[] args)  
      void setStructure​(Structure s)  
      void setTitle​(java.lang.String label)  
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • BiojavaJmol

        public BiojavaJmol()
    • Method Detail

      • main

        public static void main​(java.lang.String[] args)
      • jmolInClassPath

        public static boolean jmolInClassPath()
        returns true if Jmol can be found in the classpath, otherwise false.
        Returns:
        true/false depending if Jmol can be found
      • evalString

        public void evalString​(java.lang.String rasmolScript)
      • setStructure

        public void setStructure​(Structure s)
      • setTitle

        public void setTitle​(java.lang.String label)