Package org.biojava.bio.program.abi
Class ABIFChromatogram.Parser
- java.lang.Object
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- org.biojava.bio.program.abi.ABIFParser
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- org.biojava.bio.program.abi.ABIFChromatogram.Parser
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- Enclosing class:
- ABIFChromatogram
protected class ABIFChromatogram.Parser extends ABIFParser
An extension ofABIFParser
that reads the particular fields from the ABIF that contain the chromatogram data and initializes the fields in its enclosingABIFChromatogram
instance.
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Nested Class Summary
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Nested classes/interfaces inherited from class org.biojava.bio.program.abi.ABIFParser
ABIFParser.DataAccess, ABIFParser.TaggedDataRecord
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Method Summary
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Methods inherited from class org.biojava.bio.program.abi.ABIFParser
decodeDNAToken, getAllDataRecords, getDataAccess, getDataRecord
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Constructor Detail
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Parser
public Parser(java.io.InputStream in) throws java.io.IOException, UnsupportedChromatogramFormatException
- Throws:
java.io.IOException
UnsupportedChromatogramFormatException
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Parser
public Parser(java.io.File f) throws java.io.IOException, UnsupportedChromatogramFormatException
- Throws:
java.io.IOException
UnsupportedChromatogramFormatException
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