Package htsjdk.samtools.cram.compression
Class RANSExternalCompressor
- java.lang.Object
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- htsjdk.samtools.cram.compression.ExternalCompressor
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- htsjdk.samtools.cram.compression.RANSExternalCompressor
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public final class RANSExternalCompressor extends ExternalCompressor
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Field Summary
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Fields inherited from class htsjdk.samtools.cram.compression.ExternalCompressor
NO_COMPRESSION_ARG
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Constructor Summary
Constructors Constructor Description RANSExternalCompressor(int order, RANS rans)
RANSExternalCompressor(RANS rans)
We use a shared RANS instance for all compressors.RANSExternalCompressor(RANS.ORDER order, RANS rans)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description byte[]
compress(byte[] data)
boolean
equals(Object o)
RANS.ORDER
getOrder()
int
hashCode()
String
toString()
byte[]
uncompress(byte[] data)
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Methods inherited from class htsjdk.samtools.cram.compression.ExternalCompressor
getCompressorForMethod, getMethod
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Constructor Detail
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RANSExternalCompressor
public RANSExternalCompressor(RANS rans)
We use a shared RANS instance for all compressors.- Parameters:
rans
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RANSExternalCompressor
public RANSExternalCompressor(int order, RANS rans)
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RANSExternalCompressor
public RANSExternalCompressor(RANS.ORDER order, RANS rans)
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Method Detail
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compress
public byte[] compress(byte[] data)
- Specified by:
compress
in classExternalCompressor
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uncompress
public byte[] uncompress(byte[] data)
- Specified by:
uncompress
in classExternalCompressor
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getOrder
public RANS.ORDER getOrder()
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toString
public String toString()
- Overrides:
toString
in classExternalCompressor
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equals
public boolean equals(Object o)
- Overrides:
equals
in classExternalCompressor
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hashCode
public int hashCode()
- Overrides:
hashCode
in classExternalCompressor
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