Package org.forester.surfacing
Class DomainLengthsTable
- java.lang.Object
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- org.forester.surfacing.DomainLengthsTable
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public class DomainLengthsTable extends java.lang.Object
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Constructor Summary
Constructors Constructor Description DomainLengthsTable()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
addLengths(java.util.List<Protein> protein_list)
DescriptiveStatistics
calculateMeanBasedStatisticsForAllSpecies()
DescriptiveStatistics
calculateMeanBasedStatisticsForDomain(java.lang.String domain_id)
DescriptiveStatistics
calculateMeanBasedStatisticsForSpecies(Species species)
java.lang.StringBuilder
createMeanBasedStatisticsPerSpeciesTable()
DomainLengths
getDomainLengths(java.lang.String domain_id)
java.util.List<DomainLengths>
getDomainLengthsList()
DescriptiveStatistics
getLengthStatistic(java.lang.String domain_id, Species species)
java.util.List<Species>
getSpecies()
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Method Detail
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addLengths
public void addLengths(java.util.List<Protein> protein_list)
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calculateMeanBasedStatisticsForAllSpecies
public DescriptiveStatistics calculateMeanBasedStatisticsForAllSpecies()
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calculateMeanBasedStatisticsForDomain
public DescriptiveStatistics calculateMeanBasedStatisticsForDomain(java.lang.String domain_id)
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calculateMeanBasedStatisticsForSpecies
public DescriptiveStatistics calculateMeanBasedStatisticsForSpecies(Species species)
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createMeanBasedStatisticsPerSpeciesTable
public java.lang.StringBuilder createMeanBasedStatisticsPerSpeciesTable()
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getDomainLengths
public DomainLengths getDomainLengths(java.lang.String domain_id)
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getDomainLengthsList
public java.util.List<DomainLengths> getDomainLengthsList()
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getLengthStatistic
public DescriptiveStatistics getLengthStatistic(java.lang.String domain_id, Species species)
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getSpecies
public java.util.List<Species> getSpecies()
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