Package org.forester.phylogeny.data
Class Identifier
- java.lang.Object
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- org.forester.phylogeny.data.Identifier
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- All Implemented Interfaces:
PhylogenyData
public final class Identifier extends java.lang.Object implements PhylogenyData
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Constructor Summary
Constructors Constructor Description Identifier()
Identifier(java.lang.String value)
Identifier(java.lang.String value, java.lang.String provider)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.StringBuffer
asSimpleText()
java.lang.StringBuffer
asText()
PhylogenyData
copy()
Creates a new PhylogenyData object with identical values as this PhylogenyData.boolean
equals(java.lang.Object o)
java.lang.String
getProvider()
java.lang.String
getValue()
java.lang.String
getValuePlusProvider()
int
hashCode()
boolean
isEqual(PhylogenyData data)
Compares this PhylogenyData to PhylogenyData data.java.lang.StringBuffer
toNHX()
void
toPhyloXML(java.io.Writer writer, int level, java.lang.String indentation)
Writes a phyloXML representation of this phylogeny data.java.lang.String
toString()
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Method Detail
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asSimpleText
public java.lang.StringBuffer asSimpleText()
- Specified by:
asSimpleText
in interfacePhylogenyData
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asText
public java.lang.StringBuffer asText()
- Specified by:
asText
in interfacePhylogenyData
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getValuePlusProvider
public java.lang.String getValuePlusProvider()
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copy
public PhylogenyData copy()
Description copied from interface:PhylogenyData
Creates a new PhylogenyData object with identical values as this PhylogenyData. This ~should~ return a deep copy, but not there yet.- Specified by:
copy
in interfacePhylogenyData
- Returns:
- a ~deep~ copy of this PhylogenyData
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equals
public boolean equals(java.lang.Object o)
- Overrides:
equals
in classjava.lang.Object
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getProvider
public java.lang.String getProvider()
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getValue
public java.lang.String getValue()
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hashCode
public int hashCode()
- Overrides:
hashCode
in classjava.lang.Object
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isEqual
public boolean isEqual(PhylogenyData data)
Description copied from interface:PhylogenyData
Compares this PhylogenyData to PhylogenyData data. In general, this should return true if and only if all fiels are exactly identical.- Specified by:
isEqual
in interfacePhylogenyData
- Returns:
- in general, true if and only if all fiels are exactly identical, false otherwise
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toNHX
public java.lang.StringBuffer toNHX()
- Specified by:
toNHX
in interfacePhylogenyData
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toPhyloXML
public void toPhyloXML(java.io.Writer writer, int level, java.lang.String indentation) throws java.io.IOException
Description copied from interface:PhylogenyData
Writes a phyloXML representation of this phylogeny data.- Specified by:
toPhyloXML
in interfacePhylogenyData
- Throws:
java.io.IOException
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toString
public java.lang.String toString()
- Overrides:
toString
in classjava.lang.Object
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