Class Property

    • Nested Class Summary

      Nested Classes 
      Modifier and Type Class Description
      static class  Property.AppliesTo  
    • Constructor Summary

      Constructors 
      Constructor Description
      Property​(java.lang.String ref, java.lang.String value, java.lang.String unit, java.lang.String datatype, Property.AppliesTo applies_to)  
      Property​(java.lang.String ref, java.lang.String value, java.lang.String unit, java.lang.String datatype, Property.AppliesTo applies_to, java.lang.String id_ref)  
    • Constructor Detail

      • Property

        public Property​(java.lang.String ref,
                        java.lang.String value,
                        java.lang.String unit,
                        java.lang.String datatype,
                        Property.AppliesTo applies_to)
      • Property

        public Property​(java.lang.String ref,
                        java.lang.String value,
                        java.lang.String unit,
                        java.lang.String datatype,
                        Property.AppliesTo applies_to,
                        java.lang.String id_ref)
    • Method Detail

      • asText

        public java.lang.StringBuffer asText()
        Specified by:
        asText in interface PhylogenyData
      • copy

        public PhylogenyData copy()
        Description copied from interface: PhylogenyData
        Creates a new PhylogenyData object with identical values as this PhylogenyData. This ~should~ return a deep copy, but not there yet.
        Specified by:
        copy in interface PhylogenyData
        Returns:
        a ~deep~ copy of this PhylogenyData
      • getDataType

        public java.lang.String getDataType()
      • getIdRef

        public java.lang.String getIdRef()
      • getRef

        public java.lang.String getRef()
      • getUnit

        public java.lang.String getUnit()
      • getValue

        public java.lang.String getValue()
      • isEqual

        public boolean isEqual​(PhylogenyData data)
        Description copied from interface: PhylogenyData
        Compares this PhylogenyData to PhylogenyData data. In general, this should return true if and only if all fiels are exactly identical.
        Specified by:
        isEqual in interface PhylogenyData
        Returns:
        in general, true if and only if all fiels are exactly identical, false otherwise
      • setValue

        public void setValue​(java.lang.String value)
      • toNHX

        public java.lang.StringBuffer toNHX()
        Specified by:
        toNHX in interface PhylogenyData
      • toPhyloXML

        public void toPhyloXML​(java.io.Writer writer,
                               int level,
                               java.lang.String indentation)
                        throws java.io.IOException
        Description copied from interface: PhylogenyData
        Writes a phyloXML representation of this phylogeny data.
        Specified by:
        toPhyloXML in interface PhylogenyData
        Throws:
        java.io.IOException
      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object
      • createFromNhxString

        public static Property createFromNhxString​(java.lang.String nhx)
                                            throws java.lang.IllegalArgumentException
        Throws:
        java.lang.IllegalArgumentException