vg
tools for working with variation graphs
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#include "index_registry.hpp"
#include <iostream>
#include <sstream>
#include <vector>
#include <map>
#include <bdsg/hash_graph.hpp>
#include <bdsg/packed_graph.hpp>
#include <bdsg/odgi.hpp>
#include <xg.hpp>
#include <gbwt/variants.h>
#include <vg/io/vpkg.hpp>
#include <gcsa/gcsa.h>
#include <gcsa/algorithms.h>
#include "vg.hpp"
#include "handle.hpp"
#include "utility.hpp"
#include "constructor.hpp"
#include "hash_map.hpp"
#include "haplotype_indexer.hpp"
#include "phase_unfolder.hpp"
#include "gbwt_helper.hpp"
#include "kmer.hpp"
#include "source_sink_overlay.hpp"
#include "io/save_handle_graph.hpp"
#include "algorithms/gfa_to_handle.hpp"
#include "algorithms/prune.hpp"
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