Class CompareGtcFiles


  • public class CompareGtcFiles
    extends CommandLineProgram
    A simple tool to compare two Illumina GTC files.
    • Field Detail

      • INPUT

        @Argument(shortName="I",
                  doc="GTC input files to compare.",
                  minElements=2,
                  maxElements=2)
        public List<File> INPUT
      • ILLUMINA_BEAD_POOL_MANIFEST_FILE

        @Argument(shortName="BPM_FILE",
                  doc="The Illumina Bead Pool Manifest (.bpm) file")
        public File ILLUMINA_BEAD_POOL_MANIFEST_FILE
    • Constructor Detail

      • CompareGtcFiles

        public CompareGtcFiles()
    • Method Detail

      • doWork

        protected int doWork()
        Description copied from class: CommandLineProgram
        Do the work after command line has been parsed. RuntimeException may be thrown by this method, and are reported appropriately.
        Specified by:
        doWork in class CommandLineProgram
        Returns:
        program exit status.