Package picard.illumina.parser
Class MultiTileLocsParser
- java.lang.Object
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- picard.illumina.parser.MultiTileParser<picard.illumina.parser.PositionalData>
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- picard.illumina.parser.MultiTileLocsParser
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- All Implemented Interfaces:
Iterator<picard.illumina.parser.PositionalData>
public class MultiTileLocsParser extends MultiTileParser<picard.illumina.parser.PositionalData>
Read locs file that contains multiple tiles in a single file. A tile index is needed to parse this file so that {tile number, cluster number} can be converted into absolute record number in file.
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Constructor Summary
Constructors Constructor Description MultiTileLocsParser(TileIndex tileIndex, List<Integer> requestedTiles, File locsFile, int lane)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
close()
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Methods inherited from class picard.illumina.parser.MultiTileParser
getTileOfNextCluster, hasNext, next, remove, seekToTile, supportedTypes, verifyData
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface java.util.Iterator
forEachRemaining
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