Package picard.fastq

Interface ReadNameEncoder

    • Method Detail

      • generateReadName

        String generateReadName​(ClusterData cluster,
                                Integer pairNumber)
        Generates a read name string for the provided cluster.
        Parameters:
        cluster - The cluster whose reads are having its name generated
        pairNumber - 1 if this is the first of the pair, 2 if it is the second, or null if this not a paired read.
        Returns:
        The read name