public class FragmentTest
extends java.lang.Object
Constructor and Description |
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FragmentTest() |
public void setUp()
public void testFragment()
public void testAddAtom()
public void testAddBond()
public void testImportFrag() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testImportFragWithIntraFragBonds1() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testImportFragWithIntraFragBonds2() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testGetIDFromLocant()
public void testGetAtomByLocant()
public void testGetAtomByID()
public void testFindBond()
public void testGetChainLength()
public void testRelabelSuffixLocants() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelCarbamimidamido() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelHydrazonoHydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelCarbonimidoyl() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelHydrazonicAmide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelHydrazonate() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelHexanDiamide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelDiimidooxalicDiamide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelHydrazinecarbohydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelCarbonicDihydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelSulfonoThioate() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelAcetoanilide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelPyridine() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelPiperazine() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testLabelCarboximidohydrazide() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testIndicatedHydrogen() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testSpareValenciesOnAromaticAtoms() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testConvertSpareValenciesToDoubleBonds() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testGetAtomNeighbours() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testIsCharacteristicAtomSuffix() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testIsCharacteristicAtomAldehyde() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testIsCharacteristicAtomFunctionalAtom() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
public void testIsCharacteristicAtomHydroxy() throws uk.ac.cam.ch.wwmm.opsin.StructureBuildingException
uk.ac.cam.ch.wwmm.opsin.StructureBuildingException