Class PassingVariantFilter
- java.lang.Object
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- htsjdk.variant.variantcontext.filter.PassingVariantFilter
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- All Implemented Interfaces:
VariantContextFilter
,Predicate<VariantContext>
public class PassingVariantFilter extends Object implements VariantContextFilter
A Predicate on VariantContexts that returns true at sites that are either unfiltered, or passing (as variants).
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Constructor Summary
Constructors Constructor Description PassingVariantFilter()
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Method Detail
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test
public boolean test(VariantContext variantContext)
- Specified by:
test
in interfacePredicate<VariantContext>
- Parameters:
variantContext
- the record to examine for being a SNP- Returns:
- true if variantContext is a SNP
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