Serialized Form
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Package edu.isi.pegasus.common.credential
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Class edu.isi.pegasus.common.credential.CredentialHandlerFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.common.logging
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Class edu.isi.pegasus.common.logging.LogFormatterFactoryException extends FactoryException implements Serializable
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Class edu.isi.pegasus.common.logging.LogManagerFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.common.util
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Class edu.isi.pegasus.common.util.FactoryException extends java.lang.RuntimeException implements Serializable
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Serialized Fields
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mClassname
java.lang.String mClassname
The name of the class that was trying to be instantiated when this error occured, or some other signifier like module name.
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Class edu.isi.pegasus.common.util.ProfileParserException extends java.lang.Exception implements Serializable
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Serialized Fields
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m_position
int m_position
Remembers the position that cause the exception to be thrown.
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Package edu.isi.pegasus.gridftp
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Class edu.isi.pegasus.gridftp.DirectoryNotEmptyException extends GridFTPException implements Serializable
- serialVersionUID:
- 1L
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Class edu.isi.pegasus.gridftp.DirectoryRemovalException extends GridFTPException implements Serializable
- serialVersionUID:
- 1L
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Class edu.isi.pegasus.gridftp.FileExistsException extends GridFTPException implements Serializable
- serialVersionUID:
- 1L
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Class edu.isi.pegasus.gridftp.GridFTPException extends java.lang.Exception implements Serializable
- serialVersionUID:
- 1L
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Class edu.isi.pegasus.gridftp.NoSuchFileException extends GridFTPException implements Serializable
- serialVersionUID:
- 1L
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Class edu.isi.pegasus.gridftp.PermissionDeniedException extends GridFTPException implements Serializable
- serialVersionUID:
- 1L
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Package edu.isi.pegasus.planner.catalog
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Class edu.isi.pegasus.planner.catalog.CatalogException extends java.lang.RuntimeException implements Serializable
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Serialized Fields
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m_next_exception
CatalogException m_next_exception
chains the next exception into line.
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Package edu.isi.pegasus.planner.catalog.replica
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Class edu.isi.pegasus.planner.catalog.replica.ReplicaCatalogException extends CatalogException implements Serializable
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Package edu.isi.pegasus.planner.catalog.site
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Class edu.isi.pegasus.planner.catalog.site.SiteCatalogException extends CatalogException implements Serializable
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Class edu.isi.pegasus.planner.catalog.site.SiteFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.catalog.site.impl.old
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Class edu.isi.pegasus.planner.catalog.site.impl.old.SiteFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.catalog.transformation
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Class edu.isi.pegasus.planner.catalog.transformation.TransformationFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.catalog.transformation.classes
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Class edu.isi.pegasus.planner.catalog.transformation.classes.Arch extends java.lang.Object implements Serializable
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Serialized Fields
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_value_
java.lang.String _value_
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Class edu.isi.pegasus.planner.catalog.transformation.classes.Os extends java.lang.Object implements Serializable
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Serialized Fields
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_value_
java.lang.String _value_
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Package edu.isi.pegasus.planner.catalog.work
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Class edu.isi.pegasus.planner.catalog.work.WorkCatalogException extends CatalogException implements Serializable
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Class edu.isi.pegasus.planner.catalog.work.WorkFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.cluster
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Class edu.isi.pegasus.planner.cluster.ClustererException extends java.lang.Exception implements Serializable
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Class edu.isi.pegasus.planner.cluster.ClustererFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.cluster.aggregator
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Class edu.isi.pegasus.planner.cluster.aggregator.JobAggregatorFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.code
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Class edu.isi.pegasus.planner.code.CodeGeneratorException extends java.lang.Exception implements Serializable
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Class edu.isi.pegasus.planner.code.CodeGeneratorFactoryException extends FactoryException implements Serializable
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Class edu.isi.pegasus.planner.code.GridStartFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.code.generator.condor
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Class edu.isi.pegasus.planner.code.generator.condor.CondorQuoteParserException extends java.lang.Exception implements Serializable
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Serialized Fields
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mPosition
int mPosition
Remembers the position that cause the exception to be thrown.
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-
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Class edu.isi.pegasus.planner.code.generator.condor.CondorStyleException extends CodeGeneratorException implements Serializable
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Class edu.isi.pegasus.planner.code.generator.condor.CondorStyleFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.invocation
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Class edu.isi.pegasus.planner.invocation.Architecture extends Invocation implements Serializable
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Serialized Fields
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m_archmode
java.lang.String m_archmode
Describes the architecture runtime mode. For instance, on a SPARC can run in ILP32 or LP64 mode, an IA64 may have a backward-compatible 32bit mode (IA32), etc. -
m_domainname
java.lang.String m_domainname
Contains the optional domain name on the network. Note that incorrect setup of the host name may contain the domain portion there. -
m_machine
java.lang.String m_machine
Contains the machine's hardware description. For instance: i686, sun4u, ... -
m_nodename
java.lang.String m_nodename
Describes the machine's network node hostname. Note that incorrect host setup may include the domainname into this. -
m_release
java.lang.String m_release
Contains the operating system's version string. -
m_sysname
java.lang.String m_sysname
Describes the operating system name. For instance: linux, sunos, ... -
m_value
java.lang.StringBuffer m_value
This is the data contained between the tags. Anull
value is not valid.
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Class edu.isi.pegasus.planner.invocation.ArgEntry extends Invocation implements Serializable
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Serialized Fields
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m_position
int m_position
argument vector position -
m_value
java.lang.StringBuffer m_value
argument vector value
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-
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Class edu.isi.pegasus.planner.invocation.ArgString extends Arguments implements Serializable
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Serialized Fields
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m_value
java.lang.StringBuffer m_value
This is the data contained between the tags. There may be no data.
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-
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Class edu.isi.pegasus.planner.invocation.Arguments extends Invocation implements Serializable
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Serialized Fields
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m_executable
java.lang.String m_executable
This is the executable that was run.
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-
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Class edu.isi.pegasus.planner.invocation.ArgVector extends Arguments implements Serializable
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Serialized Fields
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m_argv
java.util.Map m_argv
This is the (new) alternative explicit argument vector. The reason for using a map is that I cannot random access an ArrayList.
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-
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Class edu.isi.pegasus.planner.invocation.Boot extends MachineInfo implements Serializable
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Serialized Fields
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mValue
java.lang.StringBuffer mValue
The text value
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Class edu.isi.pegasus.planner.invocation.CommandLine extends Invocation implements Serializable
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Serialized Fields
-
m_executable
java.lang.String m_executable
This is the executable that was run. -
m_value
java.lang.StringBuffer m_value
This is the data contained between the tags. There may be no data.
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Class edu.isi.pegasus.planner.invocation.CPU extends MachineInfo implements Serializable
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Serialized Fields
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mValue
java.lang.StringBuffer mValue
The text value
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Class edu.isi.pegasus.planner.invocation.Data extends Invocation implements Serializable
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Serialized Fields
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m_truncated
boolean m_truncated
Indicates, if the data is only partial. -
m_value
java.lang.StringBuffer m_value
This is the data contained between the tags. Anull
value is not valid.
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Class edu.isi.pegasus.planner.invocation.Descriptor extends File implements Serializable
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Serialized Fields
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m_descriptor
int m_descriptor
Descriptor of the file.
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Class edu.isi.pegasus.planner.invocation.EnvEntry extends Invocation implements Serializable
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Serialized Fields
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m_key
java.lang.String m_key
environment handle -
m_value
java.lang.StringBuffer m_value
environment value
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Class edu.isi.pegasus.planner.invocation.Environment extends Invocation implements Serializable
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Serialized Fields
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m_environment
java.util.Map m_environment
Mappings of keys to values
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Class edu.isi.pegasus.planner.invocation.Fifo extends Temporary implements Serializable
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Serialized Fields
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m_count
int m_count
optional message count for the FIFO. -
m_rsize
long m_rsize
optional number of bytes read from FIFO. -
m_wsize
long m_wsize
optional number of bytes written - but not to the FIFO. This has to do with the message size that was created from the original input message.
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Class edu.isi.pegasus.planner.invocation.File extends Invocation implements Serializable
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Serialized Fields
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m_hexbyte
java.lang.String m_hexbyte
optional first 16 byte of file, or less if shorter.
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-
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Class edu.isi.pegasus.planner.invocation.Ignore extends Invocation implements Serializable
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Class edu.isi.pegasus.planner.invocation.Invocation extends org.griphyn.vdl.Chimera implements Serializable
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Class edu.isi.pegasus.planner.invocation.InvocationRecord extends Invocation implements Serializable
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Serialized Fields
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m_cwd
WorkingDir m_cwd
Working directory at startup. -
m_derivation
java.lang.String m_derivation
Name of the Derivation that produced this invocation. -
m_duration
double m_duration
total duration of call. -
m_environment
Environment m_environment
Environment settings. -
m_gid
int m_gid
numerical group id of the effective user. -
m_group
java.lang.String m_group
symbolical group name of the effective user. -
m_hostaddr
java.net.InetAddress m_hostaddr
host address where gridlaunch ran (primary interface). -
m_hostname
java.lang.String m_hostname
Symbolic hostname where gridlaunch ran (primary interface). -
m_interface
java.lang.String m_interface
Symbolic name of primary interface we used to determine host-name and -address. -
m_job
java.util.List m_job
Job records: prejob, main job, postjob -
m_machine
Machine m_machine
The Machine object capturing machine information. -
m_pid
int m_pid
process id of gridlaunch itself. -
m_pmem
long m_pmem
Records the physical memory on the remote machine, if available. -
m_resource
java.lang.String m_resource
Resource, site or pool at which the jobs was run. -
m_start
java.util.Date m_start
start of gridlaunch timestamp. -
m_stat
java.util.List m_stat
Array with stat() and fstat() information about various files. -
m_transformation
java.lang.String m_transformation
Name of the: Transformation that produced this invocation. -
m_uid
int m_uid
numerical user id of the effective user. -
m_umask
int m_umask
Currently active umask while kickstart was executing. This is available with new kickstart, older version will have -1 at this API point. -
m_uname
Architecture m_uname
Architectural information. -
m_usage
Usage m_usage
Total resource consumption by gridlaunch and all siblings. -
m_user
java.lang.String m_user
symbolical user name of the effective user. -
m_version
java.lang.String m_version
protocol version information. -
m_wf_label
java.lang.String m_wf_label
Workflow label, currently optional? -
m_wf_stamp
java.util.Date m_wf_stamp
Workflow timestamp to make the label more unique.
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Class edu.isi.pegasus.planner.invocation.Job extends Invocation implements Serializable
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Serialized Fields
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m_arguments
Arguments m_arguments
Command-line arguments. -
m_duration
double m_duration
Duration of the job. -
m_executable
StatCall m_executable
Stat call of the executable. -
m_pid
int m_pid
Process id assigned to the job. -
m_start
java.util.Date m_start
Start time of this job. -
m_status
Status m_status
Exit condition of the job. -
m_tag
java.lang.String m_tag
This is the tag to produce the job for. Usually, it is one of "mainjob", "prejob", "postjob", or "cleanup". -
m_usage
Usage m_usage
Resource usage of this job.
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Class edu.isi.pegasus.planner.invocation.JobStatus extends Invocation implements Serializable
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Class edu.isi.pegasus.planner.invocation.JobStatusFailure extends JobStatus implements Serializable
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Serialized Fields
-
m_errno
int m_errno
This is the errno value with the reason that the invocation of the application failed. -
m_value
java.lang.String m_value
This is the data contained between the tags. Anull
value is not valid.
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-
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Class edu.isi.pegasus.planner.invocation.JobStatusRegular extends JobStatus implements Serializable
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Serialized Fields
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m_exitcode
short m_exitcode
This is exit code returned by the application.
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Class edu.isi.pegasus.planner.invocation.JobStatusSignal extends JobStatus implements Serializable
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Serialized Fields
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m_core
boolean m_core
This flag signals, if a core file was generated. Not all systems support core files. -
m_signo
short m_signo
This is the signal number that led to the process termination. -
m_value
java.lang.String m_value
This is the signal name or message contained between the tags.
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Class edu.isi.pegasus.planner.invocation.JobStatusSuspend extends JobStatus implements Serializable
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Serialized Fields
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m_signo
short m_signo
This is the signal number that led to the suspension. -
m_value
java.lang.String m_value
This is the data contained between the tags. Anull
value is not valid.
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Class edu.isi.pegasus.planner.invocation.Load extends MachineInfo implements Serializable
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Class edu.isi.pegasus.planner.invocation.Machine extends Invocation implements Serializable
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Serialized Fields
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m_pagesize
long m_pagesize
The only attribute to the machine element is required. -
m_specific
MachineSpecific m_specific
This is a grouping element for the remaining machine-specific items. -
m_stamp
Stamp m_stamp
The time when the snapshot was taken. -
m_uname
Uname m_uname
The uname child element is mandatory.
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-
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Class edu.isi.pegasus.planner.invocation.MachineInfo extends Invocation implements Serializable
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Serialized Fields
-
mAttributeMap
java.util.Map<java.lang.String,java.lang.String> mAttributeMap
An internal maps that is indexed by attribute keys.
-
-
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Class edu.isi.pegasus.planner.invocation.MachineSpecific extends Invocation implements Serializable
-
Serialized Fields
-
m_info
java.util.List<MachineInfo> m_info
The List ofMachineInfo
elements associated with the machine. -
m_tag
java.lang.String m_tag
This is the tag to group the machine-specific information. Usually, it is one of "darwin", "sunos", "linux" or "basic".
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Class edu.isi.pegasus.planner.invocation.Proc extends MachineInfo implements Serializable
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Class edu.isi.pegasus.planner.invocation.RAM extends MachineInfo implements Serializable
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Class edu.isi.pegasus.planner.invocation.Regular extends File implements Serializable
-
Serialized Fields
-
m_filename
java.lang.String m_filename
Name of the file.
-
-
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Class edu.isi.pegasus.planner.invocation.Stamp extends MachineInfo implements Serializable
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Serialized Fields
-
mValue
java.lang.StringBuffer mValue
The text value
-
-
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Class edu.isi.pegasus.planner.invocation.StatCall extends Invocation implements Serializable
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Serialized Fields
-
m_data
Data m_data
Optional data gleaned from stdout or stderr. -
m_errno
int m_errno
value of errno after calling any stat function, or -1 for failure. -
m_file
File m_file
the object (fn,fd) that the stat call was taken on. -
m_handle
java.lang.String m_handle
optional handle for stat calls of the invocation record -
m_lfn
java.lang.String m_lfn
optional logical filename associated with this stat call -
m_statinfo
StatInfo m_statinfo
the stat information itself, only present for unfailed calls.
-
-
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Class edu.isi.pegasus.planner.invocation.StatInfo extends Invocation implements Serializable
-
Serialized Fields
-
m_atime
java.util.Date m_atime
Contains the last access time timestamp. -
m_blksize
long m_blksize
Stores the blocksize of the file. -
m_blocks
long m_blocks
Stores the number of blocks of the file. -
m_ctime
java.util.Date m_ctime
Contains the creation time timestamp. -
m_gid
int m_gid
group id of the owner of the file. -
m_group
java.lang.String m_group
symbolical group name of the effective user. -
m_inode
long m_inode
We store the inode number, which let's us reference a file uniquely per filesystem. -
m_mode
int m_mode
Is the number for the file mode. This is originally an octal string. -
m_mtime
java.util.Date m_mtime
Contains the last modification time timestamp; -
m_nlink
long m_nlink
Stores the number of hard links to the file. -
m_size
long m_size
Denotes the size of the file. Files can grow rather large. -
m_uid
int m_uid
user id of the owner of the file. -
m_user
java.lang.String m_user
symbolical user name of the effective user.
-
-
-
Class edu.isi.pegasus.planner.invocation.Status extends Invocation implements Serializable
-
Serialized Fields
-
m_jobStatus
JobStatus m_jobStatus
This member variable contains the real status of the job. -
m_status
int m_status
The raw exit code, unparsed and unprepared. There are several interpretation of the value. Usually, it is interpreted as unsigned 16 bit value. The high byte contains the exit code. The low byte has the core dump flag as MSB, and the rest denote the signal number. A value of -1 denotes a failure from the grid launcher before starting the job.
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-
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Class edu.isi.pegasus.planner.invocation.Swap extends MachineInfo implements Serializable
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Class edu.isi.pegasus.planner.invocation.Task extends MachineInfo implements Serializable
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Class edu.isi.pegasus.planner.invocation.Temporary extends File implements Serializable
-
Serialized Fields
-
m_descriptor
int m_descriptor
Descriptor of the file. -
m_filename
java.lang.String m_filename
Name of the file.
-
-
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Class edu.isi.pegasus.planner.invocation.Uname extends MachineInfo implements Serializable
-
Serialized Fields
-
mValue
java.lang.StringBuffer mValue
The text value
-
-
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Class edu.isi.pegasus.planner.invocation.Usage extends Invocation implements Serializable
-
Serialized Fields
-
m_idrss
int m_idrss
integral unshared data size, or private integral resident set size. -
m_inblock
int m_inblock
block input operations. -
m_isrss
int m_isrss
integral stoack size. -
m_ixrss
int m_ixrss
integral shared memory size. -
m_majflt
int m_majflt
major page faults - incurred subsystem IO, sometimes includes swap. -
m_maxrss
int m_maxrss
maximum resident set size. -
m_minflt
int m_minflt
minor page faults - sometimes also recovered pages. -
m_msgrcv
int m_msgrcv
messages received. -
m_msgsnd
int m_msgsnd
messages sent. -
m_nivcsw
int m_nivcsw
involuntary conext switches. -
m_nsignals
int m_nsignals
number of signals sent to process. -
m_nswap
int m_nswap
number of swap operations - unused in Linux unless kernel patched. -
m_nvcsw
int m_nvcsw
voluntary context switches. -
m_outblock
int m_outblock
block output operations. -
m_stime
double m_stime
system time - time spent in system mode, seconds with fraction. -
m_utime
double m_utime
user time - time spent in user mode, seconds with fraction.
-
-
-
Class edu.isi.pegasus.planner.invocation.WorkingDir extends Invocation implements Serializable
-
Serialized Fields
-
m_value
java.lang.StringBuffer m_value
This is the data contained between the tags. Anull
value is not valid.
-
-
-
-
Package edu.isi.pegasus.planner.parser
-
Class edu.isi.pegasus.planner.parser.DAXParserFactoryException extends FactoryException implements Serializable
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Class edu.isi.pegasus.planner.parser.ScannerException extends java.lang.RuntimeException implements Serializable
-
Serialized Fields
-
m_lineno
int m_lineno
-
-
-
Class edu.isi.pegasus.planner.parser.SiteCatalogXMLParserFactoryException extends FactoryException implements Serializable
-
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Package edu.isi.pegasus.planner.parser.pdax
-
Class edu.isi.pegasus.planner.parser.pdax.PDAXCallbackFactoryException extends FactoryException implements Serializable
-
-
Package edu.isi.pegasus.planner.partitioner
-
Class edu.isi.pegasus.planner.partitioner.PartitionerFactoryException extends FactoryException implements Serializable
-
-
Package edu.isi.pegasus.planner.provenance.pasoa.pps
-
Class edu.isi.pegasus.planner.provenance.pasoa.pps.PPSFactoryException extends FactoryException implements Serializable
-
-
Package edu.isi.pegasus.planner.provenance.pasoa.producer
-
Class edu.isi.pegasus.planner.provenance.pasoa.producer.XMLProducerFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.refiner.cleanup
-
Class edu.isi.pegasus.planner.refiner.cleanup.CleanupFactoryException extends FactoryException implements Serializable
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-
Package edu.isi.pegasus.planner.selector.replica
-
Class edu.isi.pegasus.planner.selector.replica.ReplicaSelectorFactoryException extends FactoryException implements Serializable
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-
Package edu.isi.pegasus.planner.selector.site
-
Class edu.isi.pegasus.planner.selector.site.SiteSelectorFactoryException extends FactoryException implements Serializable
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-
Package edu.isi.pegasus.planner.transfer.implementation
-
Class edu.isi.pegasus.planner.transfer.implementation.TransferImplementationFactoryException extends FactoryException implements Serializable
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Package edu.isi.pegasus.planner.transfer.mapper
-
Class edu.isi.pegasus.planner.transfer.mapper.MapperException extends java.lang.RuntimeException implements Serializable
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Class edu.isi.pegasus.planner.transfer.mapper.OutputMapperFactoryException extends FactoryException implements Serializable
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-
Package edu.isi.pegasus.planner.transfer.refiner
-
Class edu.isi.pegasus.planner.transfer.refiner.TransferRefinerFactoryException extends FactoryException implements Serializable
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-
Package edu.isi.pegasus.planner.transfer.sls
-
Class edu.isi.pegasus.planner.transfer.sls.SLSFactoryException extends FactoryException implements Serializable
-