Interface | Description |
---|---|
DemographicFunction |
This interface provides methods that describe a demographic function.
|
IntervalList |
An interface for a set of coalescent intevals.
|
Class | Description |
---|---|
CataclysmicDemographic |
This class models an exponentially growing (or shrinking) population
(Parameters: N0=present-day population size; r=growth rate).
|
Coalescent |
A likelihood function for the coalescent.
|
ConstantPopulation |
This class models coalescent intervals for a constant population
(parameter: N0=present-day population size).
|
ConstExponential |
This class models exponential growth from an initial population size.
|
ConstLogistic |
This class models logistic growth from an initial population size.
|
DemographicFunction.Utils | |
EmpiricalDemographicFunction | |
Expansion |
This class models exponential growth from an initial ancestral population size.
|
ExponentialGrowth |
This class models an exponentially growing (or shrinking) population
(Parameters: N0=present-day population size; r=growth rate).
|
ExponentialLogistic |
This class models logistic growth from an initial exponential phase.
|
IntervalList.Utils | |
Intervals |
A concrete class for a set of coalescent intevals.
|
LogisticGrowth |
This class models logistic growth.
|
Enum | Description |
---|---|
IntervalList.IntervalType |
http://code.google.com/p/jebl2/