Intervals
public interface IntervalList
Modifier and Type | Interface | Description |
---|---|---|
static class |
IntervalList.IntervalType |
|
static class |
IntervalList.Utils |
Modifier and Type | Method | Description |
---|---|---|
int |
getCoalescentEvents(int i) |
Returns the number coalescent events in an interval
|
double |
getInterval(int i) |
Gets an interval.
|
int |
getIntervalCount() |
get number of intervals
|
IntervalList.IntervalType |
getIntervalType(int i) |
Returns the type of interval observed.
|
int |
getLineageCount(int i) |
Returns the number of uncoalesced lineages within this interval.
|
int |
getSampleCount() |
get the total number of sampling events.
|
double |
getTotalDuration() |
get the total duration of these intervals.
|
boolean |
isBinaryCoalescent() |
Checks whether this set of coalescent intervals is fully resolved
(i.e.
|
boolean |
isCoalescentOnly() |
Checks whether this set of coalescent intervals coalescent only
(i.e.
|
int getIntervalCount()
int getSampleCount()
double getInterval(int i)
int getLineageCount(int i)
int getCoalescentEvents(int i)
IntervalList.IntervalType getIntervalType(int i)
double getTotalDuration()
boolean isBinaryCoalescent()
boolean isCoalescentOnly()
http://code.google.com/p/jebl2/