19 #ifndef CLUSTALO_TREE_H 20 #define CLUSTALO_TREE_H 34 mseq_t *mseq,
char *ftree);
symmetric matrix structure
Definition: symmatrix.h:48
void TraverseTree(int **piOrderLR_p, tree_t *tree, mseq_t *mseq)
Depth first traversal of tree, i.e. leaf nodes (sequences) will be visited first. Order can be used t...
Definition: tree.c:166
guide-tree structure
Definition: muscle_tree.h:59
int GuideTreeFromFile(tree_t **tree, mseq_t *mseq, char *ftree)
Definition: tree.c:99
void GuideTreeUpgma(tree_t **tree, char **labels, symmatrix_t *tmat, char *ftree)
Creates a UPGMA guide tree. This is a frontend function to the ported Muscle UPGMA code ()...
Definition: tree.c:54
structure for storing multiple sequences
Definition: seq.h:47