Class DASStructureClient

  • All Implemented Interfaces:
    StructureIO

    public class DASStructureClient
    extends java.lang.Object
    implements StructureIO
    A DAS client that connects to a DAS structure service and returns a Biojava structure class.
    Since:
    1.4
    Author:
    Andreas Prlic
    • Constructor Summary

      Constructors 
      Constructor Description
      DASStructureClient​(java.lang.String url)
      Constructs a DASStructureClient object.
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      Structure getStructureById​(java.lang.String pdb_code)
      if pdb code is set (setId): connect to a DAS-structure service and retreive data.
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • DASStructureClient

        public DASStructureClient​(java.lang.String url)
        Constructs a DASStructureClient object.
        Parameters:
        url - a String ...
    • Method Detail

      • getStructureById

        public Structure getStructureById​(java.lang.String pdb_code)
                                   throws java.io.IOException
        if pdb code is set (setId): connect to a DAS-structure service and retreive data.
        Specified by:
        getStructureById in interface StructureIO
        Parameters:
        pdb_code - a String, representing a PDB code e.g. 5pti
        Returns:
        the Structure object
        Throws:
        java.io.IOException - ...